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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001285517.2 → NP_001272446.1 oxysterols receptor LXR-beta isoform a
See identical proteins and their annotated locations for NP_001272446.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AC149607, AC157653
- Consensus CDS
-
CCDS21211.1
- UniProtKB/Swiss-Prot
-
Q60644
- UniProtKB/TrEMBL
-
A0A140LHL9
- Related
- ENSMUSP00000073188.6, ENSMUST00000073488.12
- Conserved Domains (2) summary
-
- cd06954
Location:209 → 444
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:58 → 154
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
-
NM_001285518.2 → NP_001272447.1 oxysterols receptor LXR-beta isoform b
See identical proteins and their annotated locations for NP_001272447.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a. Variants 3 and 4 both encode the same isoform (b).
- Source sequence(s)
-
AC149607, AC157653
- Consensus CDS
-
CCDS71947.1
- UniProtKB/TrEMBL
- A0A140LHL9, Q8BP65
- Related
- ENSMUSP00000103543.2, ENSMUST00000107910.8
- Conserved Domains (2) summary
-
- cd06954
Location:206 → 441
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:55 → 151
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
-
NM_001285519.2 → NP_001272448.1 oxysterols receptor LXR-beta isoform b
See identical proteins and their annotated locations for NP_001272448.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a. Variants 3 and 4 both encode the same isoform (b).
- Source sequence(s)
-
AC149607, AC157653
- Consensus CDS
-
CCDS71947.1
- UniProtKB/TrEMBL
- A0A140LHL9, Q8BP65
- Related
- ENSMUSP00000103544.2, ENSMUST00000107911.8
- Conserved Domains (2) summary
-
- cd06954
Location:206 → 441
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:55 → 151
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
-
NM_001416185.1 → NP_001403114.1 oxysterols receptor LXR-beta isoform a
Status: VALIDATED
- Source sequence(s)
-
AC149607, AC157653
- UniProtKB/Swiss-Prot
-
Q60644
- Related
- ENSMUSP00000103545.2, ENSMUST00000107912.8
-
NM_009473.4 → NP_033499.1 oxysterols receptor LXR-beta isoform a
See identical proteins and their annotated locations for NP_033499.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AC149607, AC157653
- Consensus CDS
-
CCDS21211.1
- UniProtKB/Swiss-Prot
-
Q60644
- UniProtKB/TrEMBL
-
A0A140LHL9
- Related
- ENSMUSP00000126788.2, ENSMUST00000167197.8
- Conserved Domains (2) summary
-
- cd06954
Location:209 → 444
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:58 → 154
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
44199040..44204928 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030242378.2 → XP_030098238.1 oxysterols receptor LXR-beta isoform X2
- UniProtKB/TrEMBL
-
A0A140LHL9
- Conserved Domains (2) summary
-
- cd06954
Location:138 → 373
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:1 → 83
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
-
XM_017322126.2 → XP_017177615.1 oxysterols receptor LXR-beta isoform X2
- UniProtKB/TrEMBL
-
A0A140LHL9
- Conserved Domains (2) summary
-
- cd06954
Location:138 → 373
- NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
- cl02596
Location:1 → 83
- NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers