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    Eml6 EMAP like 6 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 305610, updated on 6-Jun-2024

    Summary

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    Official Symbol
    Eml6provided by RGD
    Official Full Name
    EMAP like 6provided by RGD
    Primary source
    RGD:1561672
    See related
    Ensembl:ENSRNOG00000037462 AllianceGenome:RGD:1561672
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561023; RGD1561672
    Summary
    Predicted to enable microtubule binding activity. Predicted to be located in cytoskeleton. Orthologous to human EML6 (EMAP like 6). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Muscle (RPKM 139.2), Brain (RPKM 104.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Eml6 in Genome Data Viewer
    Location:
    14q22
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (107651893..108006792, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (103471537..103806120, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (114174282..114484663, complement)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene clathrin heavy chain linker domain containing 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit S5, pseudogene 1 Neighboring gene reticulon 4 Neighboring gene spectrin, beta, non-erythrocytic 1 Neighboring gene uncharacterized LOC134481882 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    echinoderm microtubule-associated protein-like 6; similar to novel protein
    Names
    echinoderm microtubule associated protein like 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      107651893..108006792 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063273849.1 → XP_063129919.1  echinoderm microtubule-associated protein-like 6 isoform X1

      UniProtKB/TrEMBL
      A0A8I6ALD1

    2. XM_063273851.1 → XP_063129921.1  echinoderm microtubule-associated protein-like 6 isoform X3

      UniProtKB/TrEMBL
      A0A8I6AE70

    3. XM_063273850.1 → XP_063129920.1  echinoderm microtubule-associated protein-like 6 isoform X2

      UniProtKB/TrEMBL
      A0A8I6ALD1

    4. XM_063273848.1 → XP_063129918.1  echinoderm microtubule-associated protein-like 6 isoform X1

      UniProtKB/TrEMBL
      A0A8I6ALD1

    5. XM_017599535.3 → XP_017455024.1  echinoderm microtubule-associated protein-like 6 isoform X4

      UniProtKB/TrEMBL
      A0A8I6ALD1, D3ZQR6
      Related
      ENSRNOP00000053548.3

    RNA

    1. XR_010057763.1 RNA Sequence

    2. XR_010057765.1 RNA Sequence

    3. XR_010057762.1 RNA Sequence

    4. XR_010057764.1 RNA Sequence

    5. XR_010057766.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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