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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001161413.2 → NP_001154885.1 amino acid transporter heavy chain SLC3A2 isoform a
See identical proteins and their annotated locations for NP_001154885.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer variant and encodes the longer isoform (a).
- Source sequence(s)
-
AC025794
- Consensus CDS
-
CCDS50381.1
- UniProtKB/TrEMBL
-
Q3TN39
- Related
- ENSMUSP00000130194.2, ENSMUST00000170157.8
- Conserved Domains (3) summary
-
- COG0366
Location:169 → 513
- AmyA; Glycosidase [Carbohydrate transport and metabolism]
- pfam16028
Location:85 → 156
- SLC3A2_N; Solute carrier family 3 member 2 N-terminus
- cl07893
Location:139 → 468
- AmyAc_family; Alpha amylase catalytic domain family
-
NM_001410771.1 → NP_001397700.1 amino acid transporter heavy chain SLC3A2 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC025794
- UniProtKB/Swiss-Prot
- G3UWA6, P10852, Q54AH5
-
NM_008577.5 → NP_032603.3 amino acid transporter heavy chain SLC3A2 isoform b
See identical proteins and their annotated locations for NP_032603.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' coding region and 5' UTR, compared to variant 1. This results in a shorter and distinct N-terminus in isoform b, compared to isoform a.
- Source sequence(s)
-
AC025794
- Consensus CDS
-
CCDS29540.1
- UniProtKB/Swiss-Prot
- G3UWA6, P10852, Q54AH5
- UniProtKB/TrEMBL
-
Q3TN39
- Related
- ENSMUSP00000010239.5, ENSMUST00000010239.6
- Conserved Domains (2) summary
-
- pfam16028
Location:45 → 118
- SLC3A2_N; Solute carrier family 3 member 2 N-terminus
- cl38930
Location:100 → 429
- AmyAc_family; Alpha amylase catalytic domain family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000085.7 Reference GRCm39 C57BL/6J
- Range
-
8684931..8700733 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017318078.3 → XP_017173567.1 amino acid transporter heavy chain SLC3A2 isoform X1
- UniProtKB/Swiss-Prot
- G3UWA6, P10852, Q54AH5
- UniProtKB/TrEMBL
-
Q3TN39
- Conserved Domains (2) summary
-
- pfam16028
Location:45 → 118
- SLC3A2_N; Solute carrier family 3 member 2 N-terminus
- cl38930
Location:100 → 429
- AmyAc_family; Alpha amylase catalytic domain family
-
XM_006526733.4 → XP_006526796.1 amino acid transporter heavy chain SLC3A2 isoform X2
- UniProtKB/TrEMBL
-
A0A0U1RPK4
- Related
- ENSMUSP00000146016.2, ENSMUST00000206598.2
- Conserved Domains (2) summary
-
- TIGR02403
Location:179 → 297
- trehalose_treC; alpha,alpha-phosphotrehalase
- cl38930
Location:1 → 206
- AmyAc_family; Alpha amylase catalytic domain family