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    Mapk1ip1l mitogen-activated protein kinase 1 interacting protein 1-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361028, updated on 6-Jun-2024

    Summary

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    Official Symbol
    Mapk1ip1lprovided by RGD
    Official Full Name
    mitogen-activated protein kinase 1 interacting protein 1-likeprovided by RGD
    Primary source
    RGD:1311455
    See related
    Ensembl:ENSRNOG00000011611 AllianceGenome:RGD:1311455
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311455
    Summary
    Orthologous to human MAPK1IP1L (mitogen-activated protein kinase 1 interacting protein 1 like). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Adrenal (RPKM 125.3), Thymus (RPKM 106.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Mapk1ip1l in Genome Data Viewer
    Location:
    15p14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (23024757..23051189)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (20545043..20571466)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (24078280..24100546)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene WD repeat and HMG-box DNA binding protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene suppressor of cytokine signaling 4 Neighboring gene uncharacterized LOC120097123 Neighboring gene tumor protein, translationally-controlled 1 pseudogene 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MAPK-interacting and spindle-stabilizing protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108373.2 → NP_001101843.1  MAPK-interacting and spindle-stabilizing protein-like isoform 2

      See identical proteins and their annotated locations for NP_001101843.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      UniProtKB/TrEMBL
      A6KE43, B2RZ29
      Conserved Domains (1) summary
      pfam15822
      Location:5 → 236
      MISS; MAPK-interacting and spindle-stabilizing protein-like

    2. NM_001401662.2 → NP_001388591.1  MAPK-interacting and spindle-stabilizing protein-like isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      UniProtKB/TrEMBL
      A6KE44, D3ZNX9
      Related
      ENSRNOP00000015511.6, ENSRNOT00000015511.9

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      23024757..23051189
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063274393.1 → XP_063130463.1  MAPK-interacting and spindle-stabilizing protein-like isoform X1

      UniProtKB/TrEMBL
      A6KE44, D3ZNX9

    2. XM_063274394.1 → XP_063130464.1  MAPK-interacting and spindle-stabilizing protein-like isoform X2

      UniProtKB/TrEMBL
      A6KE43, B2RZ29
    Nucleotide Protein Strain
    Heading Accession and Version

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