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    4732465J04Rik RIKEN cDNA 4732465J04 gene [ Mus musculus (house mouse) ]

    Gene ID: 414105, updated on 8-Feb-2024

    Summary

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    Official Symbol
    4732465J04Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4732465J04 geneprovided by MGI
    Primary source
    MGI:MGI:3041208
    See related
    AllianceGenome:MGI:3041208
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in several structures, including heart; intestine; liver; lung; and metanephros. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver adult (RPKM 4.4), liver E18 (RPKM 1.2) and 3 other tissues See more
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    Genomic context

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    See 4732465J04Rik in Genome Data Viewer
    Location:
    10 C2; 10 49.53 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (95608995..95630846)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (95773133..95794984)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene anaphase promoting complex C subunit 15, pseudogene Neighboring gene predicted gene, 47708 Neighboring gene predicted gene, 33377 Neighboring gene predicted gene, 33543 Neighboring gene STARR-positive B cell enhancer ABC_E2335 Neighboring gene STARR-seq mESC enhancer starr_27659 Neighboring gene STARR-seq mESC enhancer starr_27660 Neighboring gene STARR-seq mESC enhancer starr_27661 Neighboring gene STARR-seq mESC enhancer starr_27662 Neighboring gene STARR-positive B cell enhancer ABC_E2962 Neighboring gene predicted gene, 24433

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. Aboudehen K, et al. J Biol Chem, 2018 Jun 15. PMID 29716997, Free PMC Article
    2. Mutagenesis of diploid mammalian genes by gene entrapment. Lin Q, et al. Nucleic Acids Res, 2006. PMID 17062627, Free PMC Article
    3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      95608995..95630846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_380952.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001001499.1: Suppressed sequence

      Description
      NM_001001499.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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