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    Zfp428 zinc finger protein 428 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361519, updated on 13-Apr-2024

    Summary

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    Official Symbol
    Zfp428provided by RGD
    Official Full Name
    zinc finger protein 428provided by RGD
    Primary source
    RGD:1564862
    See related
    Ensembl:ENSRNOG00000019802 AllianceGenome:RGD:1564862
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564862
    Summary
    Orthologous to human ZNF428 (zinc finger protein 428). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 28.3), Testes (RPKM 24.4) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Zfp428 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (89227442..89236797)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (80099520..80108875)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (81371144..81382084)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene plasminogen activator, urokinase receptor Neighboring gene cell adhesion molecule 4 Neighboring gene serine/arginine repetitive matrix 5 Neighboring gene immunity-related GTPase Q Neighboring gene phospholipase A2 inhibitor and Ly6/Plaur domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    zinc finger protein 428

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108476.2 → NP_001101946.1  zinc finger protein 428 isoform b

      See identical proteins and their annotated locations for NP_001101946.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A0G2K1B1, A6J8Z4
      Related
      ENSRNOP00000071770.1, ENSRNOT00000088829.2

    2. NM_001399610.1 → NP_001386539.1  zinc finger protein 428 isoform a

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      D3ZTF5, D4A7Q6

    3. NM_001399611.1 → NP_001386540.1  zinc finger protein 428 isoform a

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      D3ZTF5, D4A7Q6
      Related
      ENSRNOP00000026814.5, ENSRNOT00000026814.6

    4. NM_001399612.1 → NP_001386541.1  zinc finger protein 428 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A0G2K1B1, A6J8Z4

    5. NM_001399613.1 → NP_001386542.1  zinc finger protein 428 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A0G2K1B1, A6J8Z4

    6. NM_001399614.1 → NP_001386543.1  zinc finger protein 428 isoform b

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A0G2K1B1, A6J8Z4

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      89227442..89236797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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