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    RGD1565959 RGD1565959 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 301230, updated on 29-Feb-2024

    Summary

    Official Symbol
    RGD1565959provided by RGD
    Official Full Name
    RGD1565959provided by RGD
    Primary source
    RGD:1565959
    See related
    Ensembl:ENSRNOG00000042054 AllianceGenome:RGD:1565959
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Restricted expression toward (RPKM 13.2) See more
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    Genomic context

    See RGD1565959 in Genome Data Viewer
    Location:
    9q12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (20371212..20383992)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (12873697..12886364)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (14883241..14896662)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene natural cytotoxicity triggering receptor 2 like 1 Neighboring gene uncharacterized LOC120094839 Neighboring gene RIKEN cDNA 1700067P10 gene like Neighboring gene RIKEN cDNA 1700122O11 gene like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC301230

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106886.1NP_001100356.1  uncharacterized protein LOC301230 precursor

      See identical proteins and their annotated locations for NP_001100356.1

      Status: PREDICTED

      Source sequence(s)
      CH473987
      UniProtKB/TrEMBL
      A6JIG7, D3ZB01
      Related
      ENSRNOP00000062876.1, ENSRNOT00000065800.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      20371212..20383992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063266845.1XP_063122915.1  uncharacterized protein LOC301230 isoform X1