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    Gml glycosylphosphatidylinositol anchored molecule like [ Mus musculus (house mouse) ]

    Gene ID: 625599, updated on 3-Apr-2024

    Summary

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    Official Symbol
    Gmlprovided by MGI
    Official Full Name
    glycosylphosphatidylinositol anchored molecule likeprovided by MGI
    Primary source
    MGI:MGI:3644767
    See related
    Ensembl:ENSMUSG00000068349 AllianceGenome:MGI:3644767
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    HemT; EG625599
    Summary
    Orthologous to human GML (glycosylphosphatidylinositol anchored molecule like). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 37.6) See more
    Orthologs
    human all
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    Genomic context

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    See Gml in Genome Data Viewer
    Location:
    15 D3; 15 34.28 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (74685283..74691898, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (74813434..74820049, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33174 Neighboring gene lymphocyte antigen 6 family member K Neighboring gene STARR-seq mESC enhancer starr_38997 Neighboring gene glycosylphosphatidylinositol anchored molecule like 2 Neighboring gene cytochrome P450, family 11, subfamily b, polypeptide 1 Neighboring gene cytochrome P450, family 11, subfamily b, polypeptide 2 Neighboring gene predicted gene, 41347

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A novel mouse gene, HemT, encoding an hematopoietic cell-specific transcript. Xue H, et al. Gene, 1999 Apr 29. PMID 10231568
    2. Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Loughner CL, et al. Hum Genomics, 2016 Apr 21. PMID 27098205, Free PMC Article
    3. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hemT-3 protein
    Names
    GPI anchored molecule like protein
    hematopoietic cell transcript 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177524.2 → NP_001170995.1  hemT-3 protein isoform 1 precursor

      See identical proteins and their annotated locations for NP_001170995.1

      Status: VALIDATED

      Source sequence(s)
      AC139671
      Consensus CDS
      CCDS49637.1
      UniProtKB/TrEMBL
      E9PX31, Q9QUL5
      Related
      ENSMUSP00000128174.2, ENSMUST00000164026.8
      Conserved Domains (1) summary
      cd00117
      Location:47 → 131
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    2. NM_001415959.1 → NP_001402888.1  hemT-3 protein isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC139671

    3. NM_001415965.1 → NP_001402894.1  hemT-3 protein isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AC139671
      UniProtKB/TrEMBL
      E9PX31

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      74685283..74691898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030248680.1 → XP_030104540.1  hemT-3 protein isoform X1

      Conserved Domains (1) summary
      cd00117
      Location:47 → 181
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    2. XM_011245704.3 → XP_011244006.1  hemT-3 protein isoform X3

      See identical proteins and their annotated locations for XP_011244006.1

      UniProtKB/TrEMBL
      E9PX31, Q9QUL5
      Conserved Domains (1) summary
      cd00117
      Location:47 → 131
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    3. XM_011245705.2 → XP_011244007.1  hemT-3 protein isoform X3

      See identical proteins and their annotated locations for XP_011244007.1

      UniProtKB/TrEMBL
      E9PX31, Q9QUL5
      Related
      ENSMUSP00000094131.4, ENSMUST00000096400.10
      Conserved Domains (1) summary
      cd00117
      Location:47 → 131
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
    Nucleotide Protein Strain
    Heading Accession and Version

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