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    ATG5 autophagy related 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696874, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATG5provided by VGNC
    Official Full Name
    autophagy related 5provided by VGNC
    Primary source
    VGNC:VGNC:70165
    Locus tag
    EGK_15205
    See related
    Ensembl:ENSMMUG00000019679
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATG5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (66883461..67018846)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (103821448..103994012)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677534 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene crystallin beta-gamma domain containing 1 Neighboring gene U6 spliceosomal RNA Neighboring gene PR/SET domain 1 Neighboring gene uncharacterized LOC114677390

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in C-terminal protein lipidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to nitrogen starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Atg12-Atg5-Atg16 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy protein 5
    Names
    ATG5 autophagy related 5 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      66883461..67018846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001088300.3 → XP_001088300.1  autophagy protein 5 isoform X1

      See identical proteins and their annotated locations for XP_001088300.1

      UniProtKB/TrEMBL
      A0A5F7ZYF8, A0A8J8XDF0, F7CH17, G7MQ04
      Related
      ENSMMUP00000070664.1, ENSMMUT00000080113.1
      Conserved Domains (1) summary
      pfam04106
      Location:79 → 270
      APG5; Autophagy protein Apg5

    2. XM_015137017.2 → XP_014992503.1  autophagy protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJY3, F7GH37
      Related
      ENSMMUP00000074063.1, ENSMMUT00000104187.1
      Conserved Domains (1) summary
      pfam04106
      Location:1 → 192
      APG5; Autophagy protein Apg5

    3. XM_015137018.2 → XP_014992504.1  autophagy protein 5 isoform X3

      Related
      ENSMMUP00000025859.4, ENSMMUT00000027646.4
      Conserved Domains (1) summary
      pfam04106
      Location:79 → 189
      APG5; Autophagy protein Apg5

    4. XM_028847306.1 → XP_028703139.1  autophagy protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZYF8, A0A8J8XDF0, F7CH17, G7MQ04
      Related
      ENSMMUP00000025856.4, ENSMMUT00000027643.4
      Conserved Domains (1) summary
      pfam04106
      Location:79 → 270
      APG5; Autophagy protein Apg5

    5. XM_028847307.1 → XP_028703140.1  autophagy protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZYF8, A0A8J8XDF0, F7CH17, G7MQ04
      Conserved Domains (1) summary
      pfam04106
      Location:79 → 270
      APG5; Autophagy protein Apg5

    6. XM_028847308.1 → XP_028703141.1  autophagy protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJY3, F7GH37
      Related
      ENSMMUP00000033312.3, ENSMMUT00000040246.3
      Conserved Domains (1) summary
      pfam04106
      Location:1 → 192
      APG5; Autophagy protein Apg5
    Nucleotide Protein
    Heading Accession and Version

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