U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PCBP4 poly(rC) binding protein 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699225, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PCBP4provided by VGNC
    Official Full Name
    poly(rC) binding protein 4provided by VGNC
    Primary source
    VGNC:VGNC:84058
    Locus tag
    EGK_11579
    See related
    Ensembl:ENSMMUG00000022205
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PCBP4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (108086702..108096807, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (90268864..90278933)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene uncharacterized LOC114676357 Neighboring gene G protein-coupled receptor 62 Neighboring gene uncharacterized LOC114676358 Neighboring gene abhydrolase domain containing 14B Neighboring gene aminoacylase-1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    poly(rC)-binding protein 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260867.1 → NP_001247796.1  poly(rC)-binding protein 4

      See identical proteins and their annotated locations for NP_001247796.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045086
      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Related
      ENSMMUP00000072531.1, ENSMMUT00000098713.1
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      108086702..108096807 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130556.2 → XP_014986042.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    2. XM_015130550.2 → XP_014986036.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Related
      ENSMMUP00000077566.1, ENSMMUT00000092557.1
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    3. XM_015130551.2 → XP_014986037.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    4. XM_028843155.1 → XP_028698988.1  poly(rC)-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZR06, F6Z9M6
      Related
      ENSMMUP00000029237.4, ENSMMUT00000031240.4
      Conserved Domains (3) summary
      cd22517
      Location:56 → 125
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:140 → 211
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:280 → 347
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    5. XM_015130553.2 → XP_014986039.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    6. XM_015130555.2 → XP_014986041.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    7. XM_015130552.2 → XP_014986038.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZR06, A0A8J8Y9Z3, F6ZF58, F6ZFV1, G7ML43
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.