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    Adra2c adrenoceptor alpha 2C [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24175, updated on 11-Apr-2024

    Summary

    Official Symbol
    Adra2cprovided by RGD
    Official Full Name
    adrenoceptor alpha 2Cprovided by RGD
    Primary source
    RGD:2058
    See related
    Ensembl:ENSRNOG00000009299 AllianceGenome:RGD:2058
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable several functions, including alpha-2A adrenergic receptor binding activity; alpha2-adrenergic receptor activity; and protein dimerization activity. Involved in several processes, including negative regulation of uterine smooth muscle contraction; positive regulation of vasoconstriction; and regulation of sensory perception of pain. Located in axon terminus and neuronal cell body. Is active in glutamatergic synapse. Is integral component of postsynaptic density membrane. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human ADRA2C (adrenoceptor alpha 2C). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See Adra2c in Genome Data Viewer
    Location:
    14q21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (79695514..79697476, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (75470884..75472846, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (80730307..80732010, complement)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene H6 family homeobox 1 Neighboring gene uncharacterized LOC134481908 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene LDL receptor related protein associated protein 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables alpha-2A adrenergic receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables alpha2-adrenergic receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables alpha2-adrenergic receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables epinephrine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables epinephrine binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in axon terminus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density membrane EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in postsynaptic density membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    alpha-2C adrenergic receptor
    Names
    Adrenergic alpha2C- receptor class I
    Adrenergic, alpha2C-, receptor class I
    adrenergic receptor, alpha 2c
    adrenergic, alpha-2C-, receptor
    alpha-2 adrenergic receptor subtype C4
    alpha-2C adrenoceptor
    alpha-2C adrenoreceptor
    alpha-2CAR

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138506.2NP_612515.2  alpha-2C adrenergic receptor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000014
      UniProtKB/Swiss-Prot
      P22086
      UniProtKB/TrEMBL
      A6IK05
      Related
      ENSRNOP00000012322.1, ENSRNOT00000012322.4
      Conserved Domains (1) summary
      cd15323
      Location:60444
      7tmA_alpha2C_AR; alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      79695514..79697476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)