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    Speer2 spermatogenesis associated glutamate (E)-rich protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 224318, updated on 6-Jun-2024

    Summary

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    Official Symbol
    Speer2provided by MGI
    Official Full Name
    spermatogenesis associated glutamate (E)-rich protein 2provided by MGI
    Primary source
    MGI:MGI:2668488
    See related
    Ensembl:ENSMUSG00000063163 AllianceGenome:MGI:2668488
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SPEER-2
    Expression
    Restricted expression toward testis adult (RPKM 6.4) See more
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    Genomic context

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    See Speer2 in Genome Data Viewer
    Location:
    16 C2; 16 40.11 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (69653762..69660617, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (69856874..69863762, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930428D20 gene Neighboring gene predicted gene, 18897 Neighboring gene STARR-seq mESC enhancer starr_41199 Neighboring gene predicted gene, 41471 Neighboring gene STARR-seq mESC enhancer starr_41200 Neighboring gene STARR-seq mESC enhancer starr_41201 Neighboring gene STARR-seq mESC enhancer starr_41202 Neighboring gene STARR-seq mESC enhancer starr_41203 Neighboring gene proteasome (prosome, macropain) 26S subunit, ATPase 3 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. SPEER--a new family of testis-specific genes from the mouse. Spiess AN, et al. Biol Reprod, 2003 Jun. PMID 12606357
    2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    spermatogenesis associated glutamate (E)-rich protein 2
    Names
    sperm-associated glutamate (E)-rich protein 2
    spermatogenic-associated glutamate (E)-rich protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417057.1 → NP_001403986.1  spermatogenesis associated glutamate (E)-rich protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      CT030690
      UniProtKB/TrEMBL
      Q8CGR8

    2. NM_173069.4 → NP_775092.3  spermatogenesis associated glutamate (E)-rich protein 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CT030690
      Consensus CDS
      CCDS37375.1
      UniProtKB/TrEMBL
      E9Q9U2, Q8CGR8
      Related
      ENSMUSP00000075821.8, ENSMUST00000076500.14
      Conserved Domains (1) summary
      pfam04822
      Location:53 → 136
      Takusan; Takusan

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      69653762..69660617 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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