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    Tecrl trans-2,3-enoyl-CoA reductase-like [ Mus musculus (house mouse) ]

    Gene ID: 243078, updated on 30-Apr-2024

    Summary

    Official Symbol
    Tecrlprovided by MGI
    Official Full Name
    trans-2,3-enoyl-CoA reductase-likeprovided by MGI
    Primary source
    MGI:MGI:2444966
    See related
    Ensembl:ENSMUSG00000049537 AllianceGenome:MGI:2444966
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Srd5a2l2; D330017N19Rik
    Summary
    Predicted to enable oxidoreductase activity. Predicted to be involved in very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in catecholaminergic polymorphic ventricular tachycardia 3. Orthologous to human TECRL (trans-2,3-enoyl-CoA reductase like). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward heart adult (RPKM 12.9) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Tecrl in Genome Data Viewer
    Location:
    5 E1; 5 43.0 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (83425969..83503042, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (83278122..83355195, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 43217 Neighboring gene STARR-seq mESC enhancer starr_13520 Neighboring gene STARR-seq mESC enhancer starr_13521 Neighboring gene STARR-seq mESC enhancer starr_13522 Neighboring gene predicted gene, 52850 Neighboring gene STARR-seq mESC enhancer starr_13523 Neighboring gene STARR-seq mESC enhancer starr_13524 Neighboring gene STARR-seq mESC enhancer starr_13525 Neighboring gene predicted gene, 25765 Neighboring gene predicted gene, 25806

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Clone Names

    • MGC130344, MGC130345

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables oxidoreductase activity, acting on the CH-CH group of donors IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in very long-chain fatty acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    trans-2,3-enoyl-CoA reductase-like
    Names
    steroid 5 alpha-reductase 2-like 2
    steroid 5-alpha-reductase 2-like 2 protein
    synaptic glycoprotein SC2-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153801.3NP_722496.2  trans-2,3-enoyl-CoA reductase-like

      See identical proteins and their annotated locations for NP_722496.2

      Status: VALIDATED

      Source sequence(s)
      AK052284, AK052378, CJ066147
      Consensus CDS
      CCDS19375.1
      UniProtKB/Swiss-Prot
      Q8BFZ1, Q8CIX3
      UniProtKB/TrEMBL
      Q8BWI9
      Related
      ENSMUSP00000062122.5, ENSMUST00000053543.11
      Conserved Domains (2) summary
      cl00155
      Location:60135
      UBQ; Ubiquitin-like proteins
      cl21511
      Location:210361
      PEMT; Phospholipid methyltransferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      83425969..83503042 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)