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    Gm17509 predicted gene, 17509 [ Mus musculus (house mouse) ]

    Gene ID: 100502739, updated on 22-May-2024

    Summary

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    Official Symbol
    Gm17509provided by MGI
    Official Full Name
    predicted gene, 17509provided by MGI
    Primary source
    MGI:MGI:4937143
    See related
    Ensembl:ENSMUSG00000091423 AllianceGenome:MGI:4937143
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm17509 in Genome Data Viewer
    Location:
    13 65.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (117355230..117357637, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene 6416 Neighboring gene elongation protein 4 homolog pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:118004988-118005274 Neighboring gene STARR-seq mESC enhancer starr_35777 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:118009934-118010043 Neighboring gene ring finger protein 7 pseudogene Neighboring gene embigin Neighboring gene STARR-seq mESC enhancer starr_35778 Neighboring gene H3 histone, family 3A pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000079.7 Chromosome 13 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188751.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC123935
      Related
      ENSMUST00000165680.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      117355230..117357637 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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