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    CG43085 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12797926, updated on 10-May-2024

    Summary

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    Official Symbol
    CG43085provided by FlyBase
    Primary source
    FLYBASE:FBgn0262531
    Locus tag
    Dmel_CG43085
    See related
    AllianceGenome:FB:FBgn0262531
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG43085
    Orthologs
    all
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    Genomic context

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    See CG43085 in Genome Data Viewer
    Location:
    74E4-74E4; 3-45 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17645486..17646737, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17638586..17639837, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Protein on ecdysone puffs Neighboring gene Nedd4 family interacting protein Neighboring gene Keren Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interactions with ectoparasitic mites induce host metabolic and immune responses in flies at the expense of reproduction-associated factors. Benoit JB, et al. Parasitology, 2020 Sep. PMID 32498733, Free PMC Article
    2. Differential gene expression in a tripartite interaction: Drosophila, Spiroplasma and parasitic wasps. Higareda Alvear VM, et al. PeerJ, 2021. PMID 33717711, Free PMC Article
    3. Inter- and intra-species variation in genome-wide gene expression of Drosophila in response to parasitoid wasp attack. Salazar-Jaramillo L, et al. BMC Genomics, 2017 Apr 27. PMID 28449654, Free PMC Article
    4. Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster. Combs PA, et al. F1000Res, 2017. PMID 28299188, Free PMC Article
    5. Reproductive status alters transcriptomic response to infection in female Drosophila melanogaster. Short SM, et al. G3 (Bethesda), 2013 May 20. PMID 23550122, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43085-PA
    CG43085-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      17645486..17646737 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275067.1 → NP_001261996.1  uncharacterized protein Dmel_CG43085, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261996.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E0R971, Q6IL18

    2. NM_001259889.2 → NP_001246818.1  uncharacterized protein Dmel_CG43085, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246818.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E0R971, Q6IL18
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6IL18 Q6IL18

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