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    Orai2 ORAI calcium release-activated calcium modulator 2 [ Mus musculus (house mouse) ]

    Gene ID: 269717, updated on 12-May-2024

    Summary

    Official Symbol
    Orai2provided by MGI
    Official Full Name
    ORAI calcium release-activated calcium modulator 2provided by MGI
    Primary source
    MGI:MGI:2443195
    See related
    Ensembl:ENSMUSG00000039747 AllianceGenome:MGI:2443195
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tmem142b; A730041O15Rik
    Summary
    Predicted to enable store-operated calcium channel activity. Predicted to be involved in store-operated calcium entry. Located in membrane. Is expressed in several structures, including foregut; nervous system; nose; skin; and tooth. Orthologous to human ORAI2 (ORAI calcium release-activated calcium modulator 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in thymus adult (RPKM 40.1), spleen adult (RPKM 26.5) and 20 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Orai2 in Genome Data Viewer
    Location:
    5 G2; 5 75.84 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (136176310..136201418, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (136147456..136170697, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene leucine-rich repeats and WD repeat domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E6388 Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene STARR-positive B cell enhancer ABC_E3629 Neighboring gene Prkr interacting protein 1 (IL11 inducible) Neighboring gene STARR-positive B cell enhancer ABC_E531 Neighboring gene ribosomal protein L7A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (6)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables store-operated calcium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables store-operated calcium channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in store-operated calcium entry IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in store-operated calcium entry ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in growth cone ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein orai-2
    Names
    calcium release-activated calcium channel 2
    transmembrane protein 142B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178751.3NP_848866.2  protein orai-2

      See identical proteins and their annotated locations for NP_848866.2

      Status: VALIDATED

      Source sequence(s)
      AC087420, BB640180, BC115648
      Consensus CDS
      CCDS39326.1
      UniProtKB/Swiss-Prot
      Q8BH10, Q8C953
      UniProtKB/TrEMBL
      A3KCG2, Q14BR6
      Related
      ENSMUSP00000037137.2, ENSMUST00000041048.6
      Conserved Domains (1) summary
      pfam07856
      Location:47224
      Orai-1; Mediator of CRAC channel activity

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      136176310..136201418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006504431.5XP_006504494.1  protein orai-2 isoform X2

      See identical proteins and their annotated locations for XP_006504494.1

      UniProtKB/Swiss-Prot
      Q8BH10, Q8C953
      UniProtKB/TrEMBL
      A3KCG2, Q14BR6
      Conserved Domains (1) summary
      pfam07856
      Location:47224
      Orai-1; Mediator of CRAC channel activity
    2. XM_006504430.5XP_006504493.1  protein orai-2 isoform X2

      See identical proteins and their annotated locations for XP_006504493.1

      UniProtKB/Swiss-Prot
      Q8BH10, Q8C953
      UniProtKB/TrEMBL
      A3KCG2, Q14BR6
      Conserved Domains (1) summary
      pfam07856
      Location:47224
      Orai-1; Mediator of CRAC channel activity
    3. XM_006504429.5XP_006504492.1  protein orai-2 isoform X1

      See identical proteins and their annotated locations for XP_006504492.1

      UniProtKB/TrEMBL
      A3KCG2, A5CVE1
      Related
      ENSMUSP00000142597.2, ENSMUST00000196454.5
      Conserved Domains (1) summary
      pfam07856
      Location:61238
      Orai-1; Mediator of CRAC channel activity