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    Pom121l12 POM121 membrane glycoprotein-like 12 [ Mus musculus (house mouse) ]

    Gene ID: 432536, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Pom121l12provided by MGI
    Official Full Name
    POM121 membrane glycoprotein-like 12provided by MGI
    Primary source
    MGI:MGI:1920677
    See related
    Ensembl:ENSMUSG00000084135 AllianceGenome:MGI:1920677
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700054H16Rik
    Summary
    Predicted to enable nuclear localization sequence binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in RNA export from nucleus and protein import into nucleus. Predicted to be part of nuclear pore. Orthologous to human POM121L12 (POM121 transmembrane nucleoporin like 12). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human all
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    Genomic context

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    See Pom121l12 in Genome Data Viewer
    Location:
    11 A2; 11 8.34 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (14549240..14550316)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (14599240..14600316)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930554G24 gene Neighboring gene STARR-seq mESC enhancer starr_28661 Neighboring gene STARR-seq mESC enhancer starr_28662 Neighboring gene STARR-seq mESC enhancer starr_28663 Neighboring gene RIKEN cDNA 1700046C09 gene Neighboring gene exosome component 1 pseudogene Neighboring gene glutamine synthetase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    POM121-like protein 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164166.1 → NP_001157638.1  POM121-like protein 12

      Status: VALIDATED

      Source sequence(s)
      AK160151, AL603917, AV279043, BY716815
      Consensus CDS
      CCDS83783.1
      UniProtKB/TrEMBL
      A0A1B0GSJ4
      Related
      ENSMUSP00000147960.2, ENSMUST00000117584.3
      Conserved Domains (1) summary
      pfam15229
      Location:145 → 197
      POM121; POM121 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      14549240..14550316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_002893.2: Suppressed sequence

      Description
      NR_002893.2: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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