U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Krtap26-1 keratin associated protein 26-1 [ Mus musculus (house mouse) ]

    Gene ID: 69533, updated on 8-Feb-2024

    Summary

    Official Symbol
    Krtap26-1provided by MGI
    Official Full Name
    keratin associated protein 26-1provided by MGI
    Primary source
    MGI:MGI:1916783
    See related
    Ensembl:ENSMUSG00000071471 AllianceGenome:MGI:1916783
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310002B14Rik
    Summary
    Predicted to be located in intermediate filament. Orthologous to human KRTAP26-1 (keratin associated protein 26-1). [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Krtap26-1 in Genome Data Viewer
    Location:
    16 C3.3; 16 51.39 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (88443712..88444684, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (88646824..88647796, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 24-1 Neighboring gene RIKEN cDNA 2310079G19 gene Neighboring gene keratin associated protein 27-1 Neighboring gene ribosomal protein L13 pseudogene

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    keratin-associated protein 26-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027105.3NP_081381.1  keratin-associated protein 26-1

      See identical proteins and their annotated locations for NP_081381.1

      Status: VALIDATED

      Source sequence(s)
      AC125199
      Consensus CDS
      CCDS28298.1
      UniProtKB/Swiss-Prot
      B9EIF2, Q9D7N2
      Related
      ENSMUSP00000093626.3, ENSMUST00000095934.3
      Conserved Domains (1) summary
      pfam05287
      Location:18176
      PMG; PMG protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      88443712..88444684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)