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    Olfml1 olfactomedin-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 244198, updated on 12-May-2024

    Summary

    Official Symbol
    Olfml1provided by MGI
    Official Full Name
    olfactomedin-like 1provided by MGI
    Primary source
    MGI:MGI:2679264
    See related
    Ensembl:ENSMUSG00000051041 AllianceGenome:MGI:2679264
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ONT2; mONT2; MVAL564; 6720478C22
    Summary
    Orthologous to human OLFML1 (olfactomedin like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in subcutaneous fat pad adult (RPKM 12.9), placenta adult (RPKM 10.3) and 22 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Olfml1 in Genome Data Viewer
    Location:
    7 E3; 7 57.21 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (107166640..107190572)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (107567433..107591365)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene Neighboring gene synaptotagmin IX Neighboring gene STARR-seq mESC enhancer starr_19764 Neighboring gene STARR-positive B cell enhancer ABC_E8198 Neighboring gene STARR-positive B cell enhancer ABC_E1352 Neighboring gene STARR-seq mESC enhancer starr_19765 Neighboring gene PTPRF interacting protein, binding protein 2 (liprin beta 2) Neighboring gene STARR-seq mESC enhancer starr_19766 Neighboring gene STARR-positive B cell enhancer mm9_chr7:114807884-114808185 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:114846576-114846777 Neighboring gene STARR-seq mESC enhancer starr_19769 Neighboring gene STARR-seq mESC enhancer starr_19770 Neighboring gene cytochrome b5 reductase 2 Neighboring gene ovochymase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1)  1 citation

    General protein information

    Preferred Names
    olfactomedin-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172907.3NP_766495.1  olfactomedin-like protein 1 precursor

      See identical proteins and their annotated locations for NP_766495.1

      Status: VALIDATED

      Source sequence(s)
      AK032948, AK140277, CJ064708
      Consensus CDS
      CCDS52354.1
      UniProtKB/TrEMBL
      A0A5F8MPM3, Q8BSH2
      Related
      ENSMUSP00000114029.2, ENSMUST00000120990.2
      Conserved Domains (1) summary
      cl02549
      Location:145227
      OLF; Olfactomedin-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      107166640..107190572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)