U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Qrfp pyroglutamylated RFamide peptide [ Mus musculus (house mouse) ]

    Gene ID: 227717, updated on 12-May-2024

    Summary

    Official Symbol
    Qrfpprovided by MGI
    Official Full Name
    pyroglutamylated RFamide peptideprovided by MGI
    Primary source
    MGI:MGI:3630329
    See related
    Ensembl:ENSMUSG00000043102 AllianceGenome:MGI:3630329
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    P518
    Summary
    This gene encodes a preproprotein that is proteolytically processed to generate multiple protein products. The encoded products are members of the RFamide family of neuropeptides, characterized by their common protein C-terminus consisting of an arginine (R) and an amidated phenylalanine (F). These products include the neuropeptides QRFP-26 (26RFa) and the N-terminally extended form, QRFP-43 (43RFa). Both of these neuropeptides bind to the pyroglutamylated RFamide peptide receptor (QRFPR) and may regulate blood pressure, reproduction and food intake. [provided by RefSeq, Sep 2015]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Qrfp in Genome Data Viewer
    Location:
    2 B; 2 21.89 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (31696180..31700592, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (31806168..31810580, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancers ABC_E2611 and ABC_E9068 Neighboring gene exosome component 2 Neighboring gene predicted gene 13427 Neighboring gene predicted gene, 57832 Neighboring gene c-abl oncogene 1, non-receptor tyrosine kinase Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:31615309-31615418 Neighboring gene STARR-positive B cell enhancer ABC_E10093 Neighboring gene fibrinogen C domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_04163 Neighboring gene laminin gamma 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables orexigenic neuropeptide QRFP receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables orexigenic neuropeptide QRFP receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in grooming behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in locomotory behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of blood pressure IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of feeding behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    orexigenic neuropeptide QRFP
    Names
    P518 precursor protein (P518)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_183424.4NP_906269.1  orexigenic neuropeptide QRFP preproprotein

      See identical proteins and their annotated locations for NP_906269.1

      Status: REVIEWED

      Source sequence(s)
      AK029144, BB634210
      Consensus CDS
      CCDS15902.1
      UniProtKB/Swiss-Prot
      A2AV24, Q8CE23
      UniProtKB/TrEMBL
      Q52KM7
      Related
      ENSMUSP00000055746.3, ENSMUST00000057407.3
      Conserved Domains (1) summary
      pfam11109
      Location:16124
      RFamide_26RFa; Orexigenic neuropeptide Qrfp/P518

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      31696180..31700592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)