U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Msmb beta-microseminoprotein [ Mus musculus (house mouse) ]

    Gene ID: 17695, updated on 9-May-2024

    Summary

    Official Symbol
    Msmbprovided by MGI
    Official Full Name
    beta-microseminoproteinprovided by MGI
    Primary source
    MGI:MGI:97166
    See related
    Ensembl:ENSMUSG00000021907 AllianceGenome:MGI:97166
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PIP; PSP94; beta-MSP
    Summary
    Predicted to be located in extracellular region. Is expressed in anterior prostate gland; prostate gland dorsolateral lobe; testis; and ventral prostate gland. Used to study prostate cancer. Orthologous to human MSMB (microseminoprotein beta). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Msmb in Genome Data Viewer
    Location:
    14 B; 14 19.4 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (31863980..31880284)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (32142023..32158327)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_36333 Neighboring gene diphthamine biosynthesis 3 Neighboring gene oxidoreductase NAD-binding domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_36334 Neighboring gene STARR-seq mESC enhancer starr_36335 Neighboring gene predicted gene, 57612 Neighboring gene STARR-seq mESC enhancer starr_36337 Neighboring gene STARR-seq mESC enhancer starr_36339 Neighboring gene predicted gene, 41127 Neighboring gene eukaryotic translation initiation factor 5 pseudogene Neighboring gene nuclear receptor coactivator 4 Neighboring gene translocase of inner mitochondrial membrane 23 Neighboring gene predicted gene, 23946

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Gene trapped (2) 
    • Targeted (3)  1 citation

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    beta-microseminoprotein
    Names
    PSP-94
    beta-inhibin
    prostate secreted seminal plasma protein
    prostate secretory protein of 94 amino acids
    prostatic inhibin protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020597.3NP_065622.1  beta-microseminoprotein precursor

      See identical proteins and their annotated locations for NP_065622.1

      Status: VALIDATED

      Source sequence(s)
      AC154532
      Consensus CDS
      CCDS36862.1
      UniProtKB/Swiss-Prot
      O08540
      Related
      ENSMUSP00000022464.7, ENSMUST00000022464.14
      Conserved Domains (1) summary
      pfam05825
      Location:21113
      PSP94; Beta-microseminoprotein (PSP-94)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      31863980..31880284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315907.2XP_017171396.1  beta-microseminoprotein isoform X1

      Conserved Domains (1) summary
      pfam05825
      Location:96188
      PSP94; Beta-microseminoprotein (PSP-94)