U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Aimp1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 13722, updated on 12-May-2024

    Summary

    Official Symbol
    Aimp1provided by MGI
    Official Full Name
    aminoacyl tRNA synthetase complex-interacting multifunctional protein 1provided by MGI
    Primary source
    MGI:MGI:102774
    See related
    Ensembl:ENSMUSG00000028029 AllianceGenome:MGI:102774
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    p43; Emap2; Scye1; EMAPII; AIMP1/p43; 9830137A06Rik
    Summary
    Enables cytokine activity. Involved in leukocyte migration and positive regulation of glucagon secretion. Located in extracellular space. Part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alimentary system; branchial arch; genitourinary system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 3. Orthologous to human AIMP1 (aminoacyl tRNA synthetase complex interacting multifunctional protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in CNS E11.5 (RPKM 32.1), placenta adult (RPKM 29.4) and 24 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Aimp1 in Genome Data Viewer
    Location:
    3 G3; 3 61.48 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (132366259..132390151, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (132660498..132684390, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene GIMAP family P-loop NTPase domain containing 1 Neighboring gene predicted gene 9402 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:132346690-132347052 Neighboring gene STARR-seq mESC enhancer starr_09018 Neighboring gene TBC1 domain containing kinase Neighboring gene STARR-positive B cell enhancer ABC_E6129 Neighboring gene predicted gene, 30294 Neighboring gene predicted gene, 22322

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Gene trapped (3)  1 citation
    • Targeted (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTPase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables cytokine activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables tRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within angiogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell-cell signaling ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in leukocyte migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in leukocyte migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of endothelial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of glucagon secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of aminoacyl-tRNA synthetase multienzyme complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of aminoacyl-tRNA synthetase multienzyme complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    aminoacyl tRNA synthase complex-interacting multifunctional protein 1
    Names
    ARS inducible multifunctional protein 1
    endothelial monocyte activating polypeptide 2
    multisynthase complex auxiliary component p43
    multisynthetase complex auxiliary component p43
    small inducible cytokine subfamily E, member 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001368626.1NP_001355555.1  aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC135118
      Consensus CDS
      CCDS89689.1
      UniProtKB/Swiss-Prot
      P31230, Q60659
      UniProtKB/TrEMBL
      Q8C2U7
      Related
      ENSMUSP00000142513.3, ENSMUST00000198513.6
    2. NM_007926.2NP_031952.2  aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform 1

      See identical proteins and their annotated locations for NP_031952.2

      Status: VALIDATED

      Source sequence(s)
      AK133859, BY256548, BY631162
      Consensus CDS
      CCDS38642.1
      UniProtKB/TrEMBL
      Q3UZG4, Q8C2U7
      Related
      ENSMUSP00000029663.7, ENSMUST00000029663.11
      Conserved Domains (2) summary
      cd02799
      Location:157259
      tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
      pfam04880
      Location:17117
      NUDE_C; NUDE protein, C-terminal conserved region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      132366259..132390151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)