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    Zfp958l1 zinc finger protein 958 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102548389, updated on 11-Apr-2024

    Summary

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    Official Symbol
    Zfp958l1provided by RGD
    Official Full Name
    zinc finger protein 958 like 1provided by RGD
    Primary source
    RGD:7541342
    See related
    Ensembl:ENSRNOG00000000891 AllianceGenome:RGD:7541342
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Zfp958; AABR07035107.1
    Expression
    Biased expression in Adrenal (RPKM 377.4), Heart (RPKM 141.7) and 9 other tissues See more
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    Genomic context

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    See Zfp958l1 in Genome Data Viewer
    Location:
    12p12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (9449957..9475149, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (4413472..4438668, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (4718926..4743293)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene GTPase activating protein testicular GAP1, pseudogene 1 Neighboring gene thioredoxin-like 4A, pseudogene 1 Neighboring gene N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 1 Neighboring gene ribosomal protein S29, pseudogene 3 Neighboring gene uncharacterized LOC134481256

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 431-like
    Names
    zinc finger protein 709-like
    zinc finger protein 958

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      9449957..9475149 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063271846.1 → XP_063127916.1  zinc finger protein 431-like

      UniProtKB/TrEMBL
      F1LYY5
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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