U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RpS18 Ribosomal protein S18 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37292, updated on 19-Jun-2024

    Summary

    Official Symbol
    RpS18provided by FlyBase
    Official Full Name
    Ribosomal protein S18provided by FlyBase
    Primary source
    FLYBASE:FBgn0010411
    Locus tag
    Dmel_CG8900
    See related
    AllianceGenome:FB:FBgn0010411
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-56Fa; anon-EST:fe2D3; anon-EST:Posey27; B; BcDNA:RH43343; CG8900; Dmel\CG8900; M(2)56F; rpS18; Rps18; RS18_DROME; S13; S18
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome and nucleolus. Colocalizes with nuclear chromosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPS18 (ribosomal protein S18). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RpS18 in Genome Data Viewer
    Location:
    56F11-56F11; 2-90 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20263979..20264848)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16151484..16152353)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Proliferating cell nuclear antigen Neighboring gene plutonium Neighboring gene antisense RNA:CR43812 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cytosolic small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    colocalizes_with nuclear chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    part_of small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S18
    Names
    CG8900-PA
    CG8900-PB
    RpS18-PA
    RpS18-PB
    anon-fast-evolving-2D3
    transcription unit B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      20263979..20264848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166383.4NP_725943.1  ribosomal protein S18, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725943.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P41094, Q1WWH7, Q8MT19, Q9V911
      UniProtKB/TrEMBL
      B6IDT0
      Related
      FBpp0085585
      Conserved Domains (1) summary
      PTZ00134
      Location:1152
      PTZ00134; 40S ribosomal protein S18; Provisional
    2. NM_057616.6NP_476964.1  ribosomal protein S18, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476964.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P41094, Q1WWH7, Q8MT19, Q9V911
      UniProtKB/TrEMBL
      B6IDT0
      Related
      FBpp0085586
      Conserved Domains (1) summary
      PTZ00134
      Location:1152
      PTZ00134; 40S ribosomal protein S18; Provisional