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    Gvin-ps5 GTPase, very large interferon inducible, pseudogene 5 [ Mus musculus (house mouse) ]

    Gene ID: 668128, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gvin-ps5provided by MGI
    Official Full Name
    GTPase, very large interferon inducible, pseudogene 5provided by MGI
    Primary source
    MGI:MGI:3704114
    See related
    AllianceGenome:MGI:3704114
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm8989; Gm21911; EG668128
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    Genomic context

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    See Gvin-ps5 in Genome Data Viewer
    Location:
    7 E3; 7 55.98 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (105921603..105923735, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (106322396..106324528, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr7:113288424-113288725 Neighboring gene ornithine decarboxylase, structural 1 pseudogene Neighboring gene GTPase, very large interferon inducible 1 Neighboring gene GTPase, very large interferon inducible, pseudogene 4 Neighboring gene STARR-positive B cell enhancer mm9_chr7:113356789-113357089 Neighboring gene STARR-positive B cell enhancer mm9_chr7:113357373-113357674 Neighboring gene STARR-positive B cell enhancer mm9_chr7:113358882-113359183 Neighboring gene STARR-positive B cell enhancer mm9_chr7:113359681-113359981 Neighboring gene STARR-positive B cell enhancer ABC_E4964 Neighboring gene STARR-positive B cell enhancer ABC_E2247 Neighboring gene STARR-seq mESC enhancer starr_19749 Neighboring gene STARR-positive B cell enhancer ABC_E8196 Neighboring gene STARR-positive B cell enhancer ABC_E10460 Neighboring gene STARR-positive B cell enhancer ABC_E10461 Neighboring gene STARR-positive B cell enhancer mm9_chr7:113440593-113440894 Neighboring gene STARR-seq mESC enhancer starr_19750 Neighboring gene STARR-positive B cell enhancer ABC_E2248 Neighboring gene GTPase, very large interferon inducible, pseudogene 6 Neighboring gene predicted gene, 22372 Neighboring gene predicted gene 8995

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • GTPase, very large interferon inducible pseudogene
    • very large inducible GTPase 1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_030720.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC135640

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      105921603..105923735 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005944.2: Suppressed sequence

      Description
      NG_005944.2: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

    2. NG_019102.1: Suppressed sequence

      Description
      NG_019102.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
    Nucleotide Protein Strain
    Heading Accession and Version

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