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    AT1G70780 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843415, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT1G70780
    Gene description
    uncharacterized protein
    Primary source
    Araport:AT1G70780
    Locus tag
    AT1G70780
    See related
    TAIR:AT1G70780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See AT1G70780 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (26695166..26696392, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myosin-binding protein (Protein of unknown function, DUF593) Neighboring gene ncRNA Neighboring gene transmembrane protein (Protein of unknown function DUF2359, transmembrane) Neighboring gene inorganic carbon transport protein-like protein Neighboring gene ncRNA Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Miscellaneous features

    • Loc: c26696245-26696093 AT1G70780.uORF1
    NM_105746.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_565000.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26695166..26696392 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105746.3 → NP_565000.1  uncharacterized protein AT1G70780 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565000.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKQ5, A0A7G2E1H7, Q9S812
    Nucleotide Protein
    Heading Accession and Version

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