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    LOC103692984 uncharacterized LOC103692984 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 103692984, updated on 13-Apr-2024

    Summary

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    Symbol
    LOC103692984provided by RGD
    Full Name
    uncharacterized LOC103692984provided by RGD
    Primary source
    RGD:9397727
    See related
    AllianceGenome:RGD:9397727
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Kidney (RPKM 50.8), Brain (RPKM 42.4) and 9 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    See LOC103692984 in Genome Data Viewer
    Location:
    7q36
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (134208355..134218127, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (132329642..132339415, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (142860528..142870300, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 33 Neighboring gene activin A receptor like type 1 Neighboring gene activin A receptor type 1B Neighboring gene trafficking regulator and scaffold protein tamalin Neighboring gene uncharacterized LOC134479787 Neighboring gene uncharacterized LOC134479786 Neighboring gene nuclear receptor subfamily 4, group A, member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Altered long noncoding RNA expressions in dorsal root ganglion after rat sciatic nerve injury. Yu B, et al. Neurosci Lett, 2013 Feb 8. PMID 23274483
    2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_132098.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      134208355..134218127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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