U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Zfp326 zinc finger protein 326 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 682914, updated on 5-Mar-2024

    Summary

    Official Symbol
    Zfp326provided by RGD
    Official Full Name
    zinc finger protein 326provided by RGD
    Primary source
    RGD:1592829
    See related
    Ensembl:ENSRNOG00000047761 AllianceGenome:RGD:1592829
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable DNA binding activity; RNA polymerase II complex binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription, elongation and regulation of RNA splicing. Predicted to act upstream of or within positive regulation of transcription, DNA-templated. Predicted to be located in nuclear matrix and nucleoplasm. Predicted to be part of DBIRD complex. Orthologous to human ZNF326 (zinc finger protein 326). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Thymus (RPKM 55.5), Adrenal (RPKM 51.1) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Zfp326 in Genome Data Viewer
    Location:
    14p22
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (4246081..4286805, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (3941210..3980419, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (5016764..5036663, complement) , (4998530..5006759, complement)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551594 Neighboring gene uncharacterized LOC108352694 Neighboring gene uncharacterized LOC120096556 Neighboring gene leucine rich repeat containing 8 VRAC subunit D

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables RNA polymerase II complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within positive regulation of DNA-templated transcription ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of DNA-templated transcription elongation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of RNA splicing ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of DBIRD complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear matrix ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    DBIRD complex subunit ZNF326

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      4246081..4286805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039092634.2XP_038948562.1  DBIRD complex subunit ZNF326 isoform X2

      UniProtKB/TrEMBL
      A0A096MKE5
      Conserved Domains (1) summary
      pfam04988
      Location:322457
      AKAP95; A-kinase anchoring protein 95 (AKAP95)
    2. XM_039092633.2XP_038948561.1  DBIRD complex subunit ZNF326 isoform X1

      UniProtKB/TrEMBL
      A0A096MKE5
      Related
      ENSRNOP00000068484.2
      Conserved Domains (1) summary
      pfam04988
      Location:337472
      AKAP95; A-kinase anchoring protein 95 (AKAP95)
    3. XM_063273731.1XP_063129801.1  DBIRD complex subunit ZNF326 isoform X4

    4. XM_039092635.2XP_038948563.1  DBIRD complex subunit ZNF326 isoform X3

      Conserved Domains (1) summary
      pfam04988
      Location:337392
      AKAP95; A-kinase anchoring protein 95 (AKAP95)
    5. XM_063273732.1XP_063129802.1  DBIRD complex subunit ZNF326 isoform X5