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    GolS5 galactinol synthase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832444, updated on 7-Sep-2023

    Summary

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    Gene symbol
    GolS5
    Gene description
    galactinol synthase 5
    Primary source
    Araport:AT5G23790
    Locus tag
    AT5G23790
    See related
    TAIR:AT5G23790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGolS5; galactinol synthase 5; MRO11.17; MRO11_17
    Summary
    Predicted to encode a galactinol synthase.
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    Genomic context

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    See GolS5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (8019953..8021650, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Copper transport protein family Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 8) Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 9) Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 10) Neighboring gene amino acid permease 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_122284.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables inositol 3-alpha-galactosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in galactose metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    galactinol synthase 5
    NP_197768.1
    • galactinol synthase 5 (GolS5); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 6 (TAIR:AT4G26250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8019953..8021650 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122284.2 → NP_197768.1  galactinol synthase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197768.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FFA1
      UniProtKB/TrEMBL
      A0A5S9Y6M4
      Conserved Domains (2) summary
      PLN00176
      Location:1 → 333
      PLN00176; galactinol synthase
      COG1442
      Location:109 → 269
      RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FFA1.1

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