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    AT5G19670 Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832087, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT5G19670
    Gene description
    Exostosin family protein
    Primary source
    Araport:AT5G19670
    Locus tag
    AT5G19670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T29J13.90; T29J13_90
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    Genomic context

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    See AT5G19670 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (6646698..6649534)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ovate family protein 8 Neighboring gene SITE-1 protease Neighboring gene uncharacterized protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene staurosporin and temperature sensitive 3-like A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001343621.1
    NM_121972.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Exostosin family protein
    NP_197468.2
    • Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6646698..6649534
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121972.4 → NP_197468.2  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197468.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHL4, A0A5S9Y5M4, A0A654G2L2, A0A7G2FDT1, F4K2K9
      Conserved Domains (1) summary
      pfam03016
      Location:277 → 561
      Exostosin; Exostosin family

    2. NM_001343621.1 → NP_001332525.1  Exostosin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHL4, A0A5S9Y5M4, A0A654G2L2, A0A7G2FDT1, F4K2K9
      Conserved Domains (1) summary
      pfam03016
      Location:277 → 561
      Exostosin; Exostosin family
    Nucleotide Protein
    Heading Accession and Version

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