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    AT1G49960 Xanthine/uracil permease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841419, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT1G49960
    Gene description
    Xanthine/uracil permease family protein
    Primary source
    Araport:AT1G49960
    Locus tag
    AT1G49960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2J10.15; F2J10_15
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    Genomic context

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    See AT1G49960 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Sequence:
    Chromosome: 1; NC_003070.9 (18498639..18501886)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene telomere repeat binding factor 1 Neighboring gene CLP protease proteolytic subunit 1 Neighboring gene photosystem I reaction center subunit N Neighboring gene DNA/RNA polymerases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_103883.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Xanthine/uracil permease family protein
    NP_175418.1
    • Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G62890.3); Has 9237 Blast hits to 9206 proteins in 1901 species: Archae - 67; Bacteria - 7526; Metazoa - 351; Fungi - 134; Plants - 458; Viruses - 6; Other Eukaryotes - 695 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18498639..18501886
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103883.2 → NP_175418.1  Xanthine/uracil permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175418.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93039, Q93ZL2, Q9LPM0
      UniProtKB/TrEMBL
      A0A178WLI0, A0A5S9WNJ9, A0A654EM65
      Conserved Domains (1) summary
      cl23746
      Location:34 → 436
      Xan_ur_permease; Permease family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P93039.2

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