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    ECM15 Ecm15p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852285, updated on 17-May-2024

    Summary

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    Gene symbol
    ECM15
    Gene description
    Ecm15p
    Primary source
    FungiDB:YBL001C
    Locus tag
    YBL001C
    See related
    SGD:S000000097; AllianceGenome:SGD:S000000097
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytosol and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ECM15 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (237153..237467, complement)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene histone H2A Neighboring gene histone H2B Neighboring gene alpha,alpha-trehalase NTH2 Neighboring gene ditrans,polycis-polyprenyl diphosphate synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001134.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Peptidylprolyl cis/trans isomerases (immunophilins): biological diversity--targets--functions. Galat A. Curr Top Med Chem, 2003. PMID 12871165
    2. Tritium suicide selection identifies proteins involved in the uptake and intracellular transport of sterols in Saccharomyces cerevisiae. Sullivan DP, et al. Eukaryot Cell, 2009 Feb. PMID 19060182, Free PMC Article
    3. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article
    4. A protein interaction map of the mitotic spindle. Wong J, et al. Mol Biol Cell, 2007 Oct. PMID 17634282, Free PMC Article
    5. Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae. Kyriakou D, et al. BMC Biol, 2016 Dec 7. PMID 27927215, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ecm15p
    NP_009554.1
    • Non-essential hypothetical protein; likely exists as tetramer, may be regulated by the binding of small-molecule ligands (possibly sulfate ions), may have a role in yeast cell-wall biogenesis

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      237153..237467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178241.1 → NP_009554.1  TPA: Ecm15p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009554.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VQ01, P35195
      UniProtKB/TrEMBL
      A0A6A5Q3T4, A6ZKU7, B3LNE0, C7GM49, G2W908, N1P8U6
      Conserved Domains (1) summary
      TIGR00106
      Location:6 → 102
      TIGR00106; uncharacterized protein, MTH1187 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P35195.1

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