U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PAXX PAXX non-homologous end joining factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707874, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PAXXprovided by VGNC
    Official Full Name
    PAXX non-homologous end joining factorprovided by VGNC
    Primary source
    VGNC:VGNC:75686
    See related
    Ensembl:ENSMMUG00000021432
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C9orf142; C15H9orf142
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PAXX in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (1219214..1225631, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (1295881..1298328, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 7 Neighboring gene ATP binding cassette subfamily A member 2 Neighboring gene microRNA mir-1232 Neighboring gene chloride intracellular channel 3 Neighboring gene uncharacterized LOC106993560 Neighboring gene prostaglandin D2 synthase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via nonhomologous end joining IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nonhomologous end joining complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in site of double-strand break IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein PAXX

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193927.2 → NP_001180856.1  protein PAXX

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000131
      UniProtKB/TrEMBL
      F7EEU9, I2CTG6
      Related
      ENSMMUP00000028229.4, ENSMMUT00000030165.4
      Conserved Domains (1) summary
      pfam15384
      Location:8 → 203
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      1219214..1225631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834305.1 → XP_028690138.1  protein PAXX isoform X1

      UniProtKB/TrEMBL
      F7EEU9, I2CTG6
      Conserved Domains (1) summary
      pfam15384
      Location:8 → 203
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142

    2. XM_015116302.2 → XP_014971788.1  protein PAXX isoform X1

      UniProtKB/TrEMBL
      F7EEU9, I2CTG6
      Conserved Domains (1) summary
      pfam15384
      Location:8 → 203
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142

    3. XM_015116301.2 → XP_014971787.1  protein PAXX isoform X1

      UniProtKB/TrEMBL
      F7EEU9, I2CTG6
      Conserved Domains (1) summary
      pfam15384
      Location:8 → 203
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142

    4. XM_028834307.1 → XP_028690140.1  protein PAXX isoform X3

      Conserved Domains (1) summary
      pfam15384
      Location:8 → 194
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142

    5. XM_028834306.1 → XP_028690139.1  protein PAXX isoform X2

      UniProtKB/TrEMBL
      I2CTG6
      Conserved Domains (1) summary
      pfam15384
      Location:8 → 201
      PAXX; PAralog of XRCC4 and XLF, also called C9orf142
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials