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    Rps4y2 ribosomal protein S4, Y-linked 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 690845, updated on 11-Apr-2024

    Summary

    Official Symbol
    Rps4y2provided by RGD
    Official Full Name
    ribosomal protein S4, Y-linked 2provided by RGD
    Primary source
    RGD:1590988
    See related
    AllianceGenome:RGD:1590988
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to several human genes including RPS4Y2 (ribosomal protein S4 Y-linked 2). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Rps4y2 in Genome Data Viewer
    Location:
    4q44
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (183000913..183001846)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (181269507..181270440)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (182745448..182746381)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene fatty acyl CoA reductase 2 Neighboring gene ERGIC and golgi 2 Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 1 Neighboring gene thymosin beta-10-like Neighboring gene uncharacterized LOC120102437

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S4, Y-linked 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109612.1NP_001103082.1  ribosomal protein S4, Y-linked 2

      See identical proteins and their annotated locations for NP_001103082.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473964
      UniProtKB/TrEMBL
      A0A8L2QYQ1, A6IN57
      Conserved Domains (1) summary
      PLN00036
      Location:1260
      PLN00036; 40S ribosomal protein S4; Provisional

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      183000913..183001846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)