U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Pex12 Peroxin 12 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33256, updated on 10-May-2024

    Summary

    Official Symbol
    Pex12provided by FlyBase
    Official Full Name
    Peroxin 12provided by FlyBase
    Primary source
    FLYBASE:FBgn0031282
    Locus tag
    Dmel_CG3639
    See related
    AllianceGenome:FB:FBgn0031282
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3639; DmelPex12; Dmel\CG3639; pex12; PEX12
    Summary
    Predicted to enable ubiquitin protein ligase activity. Involved in peroxisome organization; spermatid development; and spermatocyte division. Located in peroxisome. Is expressed in adult head. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and peroxisome biogenesis disorder 3A. Orthologous to human PEX12 (peroxisomal biogenesis factor 12). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Pex12 in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (815993..818096)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (815993..818096)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nnf1b Neighboring gene DEAD box protein 21E2 Neighboring gene SAGA factor-like TAF6 Neighboring gene uncharacterized protein Neighboring gene Post-GPI attachment to proteins 2 Neighboring gene Clipper Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ubiquitin-protein transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in peroxisome organization ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in protein import into peroxisome matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein import into peroxisome matrix IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein monoubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in spermatid development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatocyte division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of peroxisomal importomer complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in peroxisomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in peroxisome ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    peroxin 12
    Names
    CG3639-PA
    CG3639-PB
    Pex12-PA
    Pex12-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      815993..818096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272915.1NP_001259844.1  peroxin 12, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259844.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4V3Q4, Q9VPT5
      UniProtKB/TrEMBL
      M9PBP1
      Conserved Domains (2) summary
      pfam04757
      Location:24209
      Pex2_Pex12; Pex2 / Pex12 amino terminal region
      pfam13639
      Location:242281
      zf-RING_2; Ring finger domain
    2. NM_134702.3NP_608546.1  peroxin 12, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608546.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4V3Q4, Q9VPT5
      UniProtKB/TrEMBL
      M9PBP1
      Related
      FBpp0077675
      Conserved Domains (2) summary
      pfam04757
      Location:24209
      Pex2_Pex12; Pex2 / Pex12 amino terminal region
      pfam13639
      Location:242281
      zf-RING_2; Ring finger domain