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    CG5346 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42653, updated on 10-May-2024

    Summary

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    Official Symbol
    CG5346provided by FlyBase
    Primary source
    FLYBASE:FBgn0038981
    Locus tag
    Dmel_CG5346
    See related
    AllianceGenome:FB:FBgn0038981
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5346
    Summary
    Predicted to enable oxidoreductase activity. Is expressed in several structures, including central brain primordium; ectoderm anlage; embryonic/larval visceral muscle cell; germ layer; and visceral muscle primordium. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG5346 in Genome Data Viewer
    Location:
    94B2-94B2; 3-75 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22520087..22528663, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18345809..18354385, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene testis-enriched HMG-box-containing protein 2 Neighboring gene Octopamine beta1 receptor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. On the Regulatory Evolution of New Genes Throughout Their Life History. Zhang JY, et al. Mol Biol Evol, 2019 Jan 1. PMID 30395322
    2. Genome-wide examination of the transcriptional response to ecdysteroids 20-hydroxyecdysone and ponasterone A in Drosophila melanogaster. Gonsalves SE, et al. BMC Genomics, 2011 Sep 29. PMID 21958154, Free PMC Article
    3. Hairy transcriptional repression targets and cofactor recruitment in Drosophila. Bianchi-Frias D, et al. PLoS Biol, 2004 Jul. PMID 15252443, Free PMC Article
    4. Minos as a genetic and genomic tool in Drosophila melanogaster. Metaxakis A, et al. Genetics, 2005 Oct. PMID 15972463, Free PMC Article
    5. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5346-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22520087..22528663 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142801.2 → NP_651058.1  uncharacterized protein Dmel_CG5346 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651058.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MZG6, Q8SY45, Q9VCZ2
      Related
      FBpp0083682
      Conserved Domains (3) summary
      COG3491
      Location:16 → 367
      PcbC; Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism]
      pfam03171
      Location:260 → 345
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
      pfam14226
      Location:20 → 131
      DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MZG6 Q8MZG6
    Q9VCZ2 Q9VCZ2

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