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    s-cup stanley-cup [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36371, updated on 10-May-2024

    Summary

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    Official Symbol
    s-cupprovided by FlyBase
    Official Full Name
    stanley-cupprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050044
    Locus tag
    Dmel_CG30044
    See related
    AllianceGenome:FB:FBgn0050044
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13152; CG13153; CG30044; Dmel\CG30044
    Summary
    Is expressed in elongation stage spermatid and primary spermatocyte. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See s-cup in Genome Data Viewer
    Location:
    49A9-49A10; 2-67 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12495672..12501459)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8383177..8388964)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Neprilysin-like 10 Neighboring gene Diuretic hormone 44 receptor 2 Neighboring gene uncharacterized protein Neighboring gene fused lobes Neighboring gene vismay Neighboring gene achintya

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Requirement for two nearly identical TGIF-related homeobox genes in Drosophila spermatogenesis. Wang Z, et al. Development, 2003 Jul. PMID 12756170
    2. Drosophila TGIF is essential for developmentally regulated transcription in spermatogenesis. Ayyar S, et al. Development, 2003 Jul. PMID 12756169
    3. Post-meiotic transcription in Drosophila testes. Barreau C, et al. Development, 2008 Jun. PMID 18434411
    4. Genome-wide mapping of in vivo targets of the Drosophila transcription factor Kruppel. Matyash A, et al. J Biol Chem, 2004 Jul 16. PMID 15131112
    5. Variation in the response to exercise stimulation in Drosophila: marathon runner versus sprinter genotypes. Riddle NC. J Exp Biol, 2020 Sep 21. PMID 32737212

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    stanley-cup
    Names
    CG30044-PB
    s-cup-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12495672..12501459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136948.3 → NP_610792.2  stanley-cup [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610792.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYB9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8DYB9 A8DYB9
    Q8T3H7 Q8T3H7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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