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    Lsp1beta Larval serum protein 1 beta [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33274, updated on 10-May-2024

    Summary

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    Official Symbol
    Lsp1betaprovided by FlyBase
    Official Full Name
    Larval serum protein 1 betaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0002563
    Locus tag
    Dmel_CG4178
    See related
    AllianceGenome:FB:FBgn0002563
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4178; DmeLSP1b; Dmel\CG4178; LSP 1; LSP-1; LSP-1 beta; Lsp-1b; Lsp-1beta; LSP-1beta; Lsp1; LSP1; Lsp1 beta; Lsp1-beta; Lsp1b; LSP1beta; Lsp1[beta]
    Summary
    Part of larval serum protein complex. Is expressed in adult head; adult heart; embryonic/larval fat body; photoreceptor cell; and spermatozoon. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See Lsp1beta in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (898500..901316)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (898500..901316)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene neither inactivation nor afterpotential A Neighboring gene long non-coding RNA:CR45348 Neighboring gene small Cajal body-specific RNA : MeU1-A24 Neighboring gene small nuclear RNA U1 at 21D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Quantitative in situ hybridization reveals extent of sequence homology between related DNA sequences in Drosophila melanogaster. Brock HW, et al. Chromosoma, 1981. PMID 6791899
    2. Cis-acting sequences sufficient for correct tissue and temporal specificity of larval serum protein 1 genes of Drosophila. Delaney SJ, et al. EMBO J, 1987 Dec 1. PMID 16453814, Free PMC Article
    3. The Drosophila Lsp-1 beta gene. A structural and phylogenetic analysis. Massey HC Jr, et al. Eur J Biochem, 1997 Apr 1. PMID 9128742
    4. Linkage of a Drosophila melanogaster U1 small nuclear RNA gene to the larval serum protein 1-beta gene. McClelland A. J Mol Biol, 1985 Oct 5. PMID 3932658
    5. Location of the LSP-1 Genes in Drosophila Species by IN SITU Hybridization. Brock HW, et al. Genetics, 1983 Jan. PMID 17246102, Free PMC Article

    See all (99) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of larval serum protein complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    larval serum protein 1 beta
    Names
    CG4178-PA
    CG4178-PB
    Lsp1beta-PA
    Lsp1beta-PB
    larval serum protein 1
    larval serum protein 1[beta]
    larval serum protein 1beta

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      898500..901316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298627.1 → NP_001285556.1  larval serum protein 1 beta, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285556.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P11996, Q29R17, Q9VPV2
      UniProtKB/TrEMBL
      X2J8F5
      Conserved Domains (3) summary
      pfam00372
      Location:161 → 496
      Hemocyanin_M; Hemocyanin, copper containing domain
      pfam03722
      Location:32 → 154
      Hemocyanin_N; Hemocyanin, all-alpha domain
      pfam03723
      Location:505 → 755
      Hemocyanin_C; Hemocyanin, ig-like domain

    2. NM_057276.4 → NP_476624.1  larval serum protein 1 beta, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476624.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P11996, Q29R17, Q9VPV2
      UniProtKB/TrEMBL
      X2J8F5
      Related
      FBpp0077690
      Conserved Domains (3) summary
      pfam00372
      Location:161 → 496
      Hemocyanin_M; Hemocyanin, copper containing domain
      pfam03722
      Location:32 → 154
      Hemocyanin_N; Hemocyanin, all-alpha domain
      pfam03723
      Location:505 → 755
      Hemocyanin_C; Hemocyanin, ig-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P11996.3 P11996
    X2J8F5 X2J8F5

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