U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    YDR524C-B uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 1466438, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    YDR524C-B
    Gene description
    uncharacterized protein
    Primary source
    FungiDB:YDR524C-B
    Locus tag
    YDR524C-B
    See related
    SGD:S000028739; AllianceGenome:SGD:S000028739; VEuPathDB:YDR524C-B
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See YDR524C-B in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (1489598..1489798, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene GTPase-activating protein AGE1 Neighboring gene uncharacterized protein Neighboring gene Api2p Neighboring gene Sna2p

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability. Lafontaine DL, et al. RNA, 1999 Mar. PMID 10094313, Free PMC Article
    2. Multiple protein/protein and protein/RNA interactions suggest roles for yeast DNA/RNA helicase Sen1p in transcription, transcription-coupled DNA repair and RNA processing. Ursic D, et al. Nucleic Acids Res, 2004. PMID 15121901, Free PMC Article
    3. Pseudouridine-mediated translation control of mRNA by methionine aminoacyl tRNA synthetase. Levi O, et al. Nucleic Acids Res, 2021 Jan 11. PMID 33305314, Free PMC Article
    4. Mapping the functional yeast ABC transporter interactome. Snider J, et al. Nat Chem Biol, 2013 Sep. PMID 23831759, Free PMC Article
    5. The S. cerevisiae m6A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts. Scutenaire J, et al. Nucleic Acids Res, 2023 Jan 25. PMID 35934316, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    NP_878067.1
    • hypothetical protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDR524C-B has a paralog, YCL048W-A, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      1489598..1489798 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184631.1 → NP_878067.1  TPA: uncharacterized protein YDR524C-B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_878067.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VTE6, Q3E6R4
      UniProtKB/TrEMBL
      A0A6V8RHF3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E6R4.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools