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    ssuC aliphatic sulfonate ABC transporter membrane subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947216, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ssuC
    Gene description
    aliphatic sulfonate ABC transporter membrane subunit
    Primary source
    ASAP:ABE-0003175
    Locus tag
    b0934
    See related
    ECOCYC:G6476
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0925; ycbM
    Summary
    Topology mapped using protein fusions. [More information is available at EcoGene: EG13705]. SsuC is the integral membrane component of the alkanesulfonate ABC transporter. [More information is available at EcoCyc: G6476].
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    Genomic context

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    Sequence:
    NC_000913.3 (994041..994832, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene aminopeptidase N Neighboring gene aliphatic sulfonate ABC transporter ATP binding subunit Neighboring gene FMNH2-dependent alkanesulfonate monooxygenase Neighboring gene aliphatic sulfonate ABC transporter periplasmic binding protein Neighboring gene NADPH-dependent FMN reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. van der Ploeg JR, et al. Arch Microbiol, 2001 Jul. PMID 11479697
    2. Deletion analysis of the Escherichia coli taurine and alkanesulfonate transport systems. Eichhorn E, et al. J Bacteriol, 2000 May. PMID 10781534, Free PMC Article
    3. Rapid topology mapping of Escherichia coli inner-membrane proteins by prediction and PhoA/GFP fusion analysis. Drew D, et al. Proc Natl Acad Sci U S A, 2002 Mar 5. PMID 11867724, Free PMC Article
    4. The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5'-phosphosulphate (APS) as a signalling molecule for sulphate excess. Bykowski T, et al. Mol Microbiol, 2002 Mar. PMID 11918818
    5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cellular response to sulfur starvation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within sulfur compound metabolic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aliphatic sulfonate ABC transporter membrane subunit
    NP_415454.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      994041..994832 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415454.4 aliphatic sulfonate ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415454.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3J368, A0A2X6ZR10
      Conserved Domains (1) summary
      PRK11365
      Location:1 → 263
      ssuC; aliphatic sulfonate ABC transporter permease SsuC
    Nucleotide Protein
    Heading Accession and Version

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