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    LOC4326256 GDSL esterase/lipase At1g28600-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326256, updated on 2-Mar-2021

    Summary

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    Gene symbol
    LOC4326256
    Gene description
    GDSL esterase/lipase At1g28600-like
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in roots before flowering (RPKM 6.5), roots after flowering (RPKM 6.2) and 5 other tissues See more
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    Genomic context

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    See LOC4326256 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (26249309..26274201)

    Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At1g28600 Neighboring gene GDSL esterase/lipase At1g28600 Neighboring gene uncharacterized LOC4326258 Neighboring gene GDSL esterase/lipase At1g28600

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

      Range
      26249309..26274201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001541919.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials