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    LOC9270116 uncharacterized LOC9270116 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9270116, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9270116
    Gene description
    uncharacterized LOC9270116
    Locus tag
    OSNPB_090482840
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9270116 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (18640325..18642315)

    Chromosome 9 - NC_029264.1Genomic Context describing neighboring genes Neighboring gene fasciclin-like arabinogalactan protein 7 Neighboring gene isoflavone 7-O-glucosyltransferase 1-like Neighboring gene uncharacterized LOC9271885 Neighboring gene UDP-glycosyltransferase 88B1-like Neighboring gene UDP-glycosyltransferase 88B1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029264.1 Chromosome 9 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC9270116
    Names
    Os09g0482840

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029264.1 Reference IRGSP-1.0 Primary Assembly

      Range
      18640325..18642315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015795970.2 → XP_015651456.1  uncharacterized protein LOC9270116

      UniProtKB/TrEMBL
      A0A0P0XPF6, A2Z2H5, A3C021
      Conserved Domains (1) summary
      cl25352
      Location:29 → 118
      EFh_PEF; The penta-EF hand (PEF) family
    Nucleotide Protein
    Heading Accession and Version

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