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    LOC4339501 vegetative cell wall protein gp1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339501, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC4339501
    Gene description
    vegetative cell wall protein gp1
    Locus tag
    OSNPB_050546300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339501 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (27119009..27120261)

    Chromosome 5 - NC_029260.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4339500 Neighboring gene uncharacterized LOC112939081 Neighboring gene wiskott-Aldrich syndrome protein homolog Neighboring gene DNA-binding protein DDB_G0278111-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029260.1 Chromosome 5 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    vegetative cell wall protein gp1
    Names
    Os05g0546300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029260.1 Reference IRGSP-1.0 Primary Assembly

      Range
      27119009..27120261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015782689.2 → XP_015638175.1  vegetative cell wall protein gp1

      UniProtKB/TrEMBL
      A0A0P0WPW0, B9FHL1, Q6L5A6
    Nucleotide Protein
    Heading Accession and Version

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