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    Fam114a2 family with sequence similarity 114, member A2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303155, updated on 13-Apr-2024

    Summary

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    Symbol
    Fam114a2provided by RGD
    Full Name
    family with sequence similarity 114, member A2provided by RGD
    Primary source
    RGD:1305362
    See related
    Ensembl:ENSRNOG00000002423 AllianceGenome:RGD:1305362
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1305362; AABR07029651.1
    Summary
    Orthologous to human FAM114A2 (family with sequence similarity 114 member A2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Heart (RPKM 192.4), Muscle (RPKM 188.2) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Fam114a2 in Genome Data Viewer
    Location:
    10q22
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (42162295..42197307, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (41661787..41696790, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (42893579..42933041, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102553349 Neighboring gene uncharacterized LOC120095106 Neighboring gene glutamate ionotropic receptor AMPA type subunit 1 Neighboring gene microfibril associated protein 3 Neighboring gene uncharacterized LOC134480689 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene SAP30-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation and degradation of tomosyn-2 de-represses insulin secretion. Bhatnagar S, et al. J Biol Chem, 2014 Sep 5. PMID 25002582, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    protein FAM114A2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402000.1 → NP_001388929.1  protein FAM114A2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/TrEMBL
      A0A8I6APK7
      Related
      ENSRNOP00000090979.1, ENSRNOT00000102829.1

    2. NM_001402010.1 → NP_001388939.1  protein FAM114A2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010

    3. NM_001402011.1 → NP_001388940.1  protein FAM114A2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      42162295..42197307 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056984664.2 → XP_056840644.1  protein FAM114A2 isoform X2

      UniProtKB/TrEMBL
      A0A8I6APK7

    2. XM_056984661.2 → XP_056840641.1  protein FAM114A2 isoform X1

    3. XM_063268983.1 → XP_063125053.1  protein FAM114A2 isoform X2

      UniProtKB/TrEMBL
      A0A8I6APK7

    4. XM_056984662.2 → XP_056840642.1  protein FAM114A2 isoform X1

    5. XM_063268984.1 → XP_063125054.1  protein FAM114A2 isoform X2

      UniProtKB/TrEMBL
      A0A8I6APK7

    6. XM_056984663.2 → XP_056840643.1  protein FAM114A2 isoform X1

    7. XM_063268982.1 → XP_063125052.1  protein FAM114A2 isoform X1

    8. XM_056984665.2 → XP_056840645.1  protein FAM114A2 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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