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    soxG sarcosine oxidase subunit gamma [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880825, updated on 24-Sep-2023

    Summary

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    Gene symbol
    soxG
    Gene description
    sarcosine oxidase subunit gamma
    Locus tag
    PA5419
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (6100135..6100770)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene sarcosine oxidase subunit beta Neighboring gene sarcosine oxidase subunit delta Neighboring gene sarcosine oxidase subunit alpha Neighboring gene formyltetrahydrofolate deformylase Neighboring gene glutathione-independent formaldehyde dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
    5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables sarcosine oxidase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within sarcosine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcosine oxidase subunit gamma
    NP_254106.1
    • class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      6100135..6100770
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_254106.1 sarcosine oxidase subunit gamma [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_254106.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9HTE5
      Conserved Domains (1) summary
      pfam04268
      Location:53 → 204
      SoxG; Sarcosine oxidase, gamma subunit family
    Nucleotide Protein
    Heading Accession and Version

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