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    GDPD4 glycerophosphodiester phosphodiesterase domain containing 2 [ Gallus gallus (chicken) ]

    Gene ID: 419084, updated on 5-Mar-2024

    Summary

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    Symbol
    GDPD4provided by CGNC
    Full Name
    glycerophosphodiester phosphodiesterase domain containing 2provided by CGNC
    Primary source
    CGNC:436
    See related
    Ensembl:ENSGALG00010002113
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GDPD4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (192996513..193031959)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (193065941..193101782)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055756 Neighboring gene aquaporin 11 Neighboring gene p21 (RAC1) activated kinase 1 Neighboring gene myosin VIIA Neighboring gene calpain 5 Neighboring gene olfactory marker protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerophosphodiester phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerophosphodiester phosphodiesterase domain-containing protein 4; glycerophosphodiester phosphodiesterase domain-containing protein 5
    Names
    glycerophosphodiester phosphodiesterase domain containing 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      192996513..193031959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040704686.2 → XP_040560620.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F1NRU6
      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    2. XM_040704690.2 → XP_040560624.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F1NRU6
      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    3. XM_417276.8 → XP_417276.2  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F1NRU6
      Related
      ENSGALP00010002849.1, ENSGALT00010004734.1
      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    4. XM_015280883.4 → XP_015136369.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      Conserved Domains (1) summary
      cl14615
      Location:234 → 467
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      193065941..193101782
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040657597.2 → XP_040513531.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    2. XM_040657598.2 → XP_040513532.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    3. XM_040657595.2 → XP_040513529.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      Conserved Domains (1) summary
      cd08610
      Location:234 → 543
      GDPD_GDE6; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

    4. XM_040657599.2 → XP_040513533.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      Conserved Domains (1) summary
      cl14615
      Location:234 → 467
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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