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    EXOC4 exocyst complex component 4 [ Gallus gallus (chicken) ]

    Gene ID: 416700, updated on 5-Mar-2024

    Summary

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    Symbol
    EXOC4provided by CGNC
    Full Name
    exocyst complex component 4provided by CGNC
    Primary source
    CGNC:6429
    See related
    Ensembl:ENSGALG00010007002
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SEC8L1
    Annotation information
    Annotation category: suggests misassembly
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See EXOC4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1959621..2369443, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1964790..2406561, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member B4 Neighboring gene uncharacterized LOC121109260 Neighboring gene leucine rich repeats and guanylate kinase domain containing Neighboring gene PHD finger protein 7-like Neighboring gene uncharacterized LOC107053233 Neighboring gene G2/M phase-specific E3 ubiquitin-protein ligase-like Neighboring gene PHD finger protein 7-like Neighboring gene PHD finger protein 7-like Neighboring gene G2/M phase-specific E3 ubiquitin-protein ligase-like Neighboring gene PHD finger protein 7-like Neighboring gene microRNA 6659 Neighboring gene G2/M phase-specific E3 ubiquitin-protein ligase-like Neighboring gene PHD finger protein 7-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Non-coding RNAs revealed during identification of genes involved in chicken immune responses. Ahanda ML, et al. Immunogenetics, 2009 Jan. PMID 19009289
    2. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
    3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in growth cone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 4
    Names
    SEC8-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199320.3 → NP_001186249.2  exocyst complex component 4

      Status: VALIDATED

      Source sequence(s)
      JAENSL010000008
      UniProtKB/TrEMBL
      A0A8V0XRT2
      Related
      ENSGALP00010009399.1, ENSGALT00010016623.1
      Conserved Domains (1) summary
      pfam04048
      Location:57 → 143
      Sec8_exocyst; Sec8 exocyst complex component specific domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1959621..2369443 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1964790..2406561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907031.1 → XP_046762987.1  exocyst complex component 4 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials