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    JAM2 junctional adhesion molecule 2 [ Gallus gallus (chicken) ]

    Gene ID: 418476, updated on 3-Apr-2024

    Summary

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    Symbol
    JAM2provided by CGNC
    Full Name
    junctional adhesion molecule 2provided by CGNC
    Primary source
    CGNC:11746
    See related
    Ensembl:ENSGALG00010010838
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See JAM2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (102613615..102647466)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (102701143..102734643)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene MIR155 host gene Neighboring gene microRNA 155 Neighboring gene mitochondrial ribosomal protein L39 Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6 Neighboring gene GA binding protein transcription factor alpha subunit Neighboring gene amyloid beta precursor protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in leukocyte tethering or rolling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein complex involved in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    junctional adhesion molecule B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006257.2 → NP_001006257.1  junctional adhesion molecule B isoform 2 precursor

      See identical proteins and their annotated locations for NP_001006257.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000020
      UniProtKB/TrEMBL
      A0A8V0Y1Z0, F1NDS0, Q5ZJD1
      Conserved Domains (3) summary
      cd00096
      Location:98 → 169
      Ig; Immunoglobulin domain
      smart00410
      Location:91 → 170
      IG_like; Immunoglobulin like
      pfam11857
      Location:180 → 214
      DUF3377; Domain of unknown function (DUF3377)

    2. NM_001397141.1 → NP_001384070.1  junctional adhesion molecule B isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000020
      UniProtKB/TrEMBL
      A0A1D5P2T1, A0A8V0YF52
      Related
      ENSGALP00010014640.1, ENSGALT00010025979.1
      Conserved Domains (2) summary
      cd00096
      Location:33 → 37
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:29 → 129
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      102613615..102647466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046940215.1 → XP_046796171.1  junctional adhesion molecule B isoform X1

    2. XM_040698409.1 → XP_040554343.1  junctional adhesion molecule B isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y8B1, A0A8V0YAJ7
      Related
      ENSGALP00010014632.1, ENSGALT00010025971.1
      Conserved Domains (2) summary
      cd00096
      Location:21 → 25
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:17 → 117
      Ig; Immunoglobulin domain

    3. XM_046940221.1 → XP_046796177.1  junctional adhesion molecule B isoform X2

    4. XM_046940228.1 → XP_046796184.1  junctional adhesion molecule B isoform X4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      102701143..102734643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907881.1 → XP_046763837.1  junctional adhesion molecule B isoform X3

      UniProtKB/TrEMBL
      A0A8V0YAJ7

    2. XM_046907879.1 → XP_046763835.1  junctional adhesion molecule B isoform X1

    3. XM_046907880.1 → XP_046763836.1  junctional adhesion molecule B isoform X2

    4. XM_046907882.1 → XP_046763838.1  junctional adhesion molecule B isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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