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    Gm38491 predicted gene, 38491 [ Mus musculus (house mouse) ]

    Gene ID: 102636808, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm38491provided by MGI
    Official Full Name
    predicted gene, 38491provided by MGI
    Primary source
    MGI:MGI:5621376
    See related
    AllianceGenome:MGI:5621376
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in CNS E14 (RPKM 2.7), CNS E11.5 (RPKM 2.5) and 4 other tissues See more
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    Genomic context

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    See Gm38491 in Genome Data Viewer
    Location:
    10 B2; 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (42459788..42461819)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (42583792..42585823)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_26490 Neighboring gene sorting nexin 3 Neighboring gene nuclear receptor subfamily 2, group E, member 1 Neighboring gene predicted gene 5036 Neighboring gene STARR-seq mESC enhancer starr_26492 Neighboring gene STARR-seq mESC enhancer starr_26493 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:42418909-42419167 Neighboring gene STARR-seq mESC enhancer starr_26494 Neighboring gene osteopetrosis associated transmembrane protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_169130.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC166260

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      42459788..42461819
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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