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    CG12589 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50157, updated on 10-May-2024

    Summary

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    Official Symbol
    CG12589provided by FlyBase
    Primary source
    FLYBASE:FBgn0040684
    Locus tag
    Dmel_CG12589
    See related
    AllianceGenome:FB:FBgn0040684
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12589
    Orthologs
    all
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    Genomic context

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    See CG12589 in Genome Data Viewer
    Location:
    82F1-82F1; 3-47.5 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5137057..5138989, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (962779..964711, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rab geranylgeranyltransferase subunit alpha Neighboring gene defective proboscis extension response 16 Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12589-PA
    CG12589-PB
    CG12589-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5137057..5138989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300239.1 → NP_001287168.1  uncharacterized protein Dmel_CG12589, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287168.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V418, Q9VN78

    2. NM_001300238.1 → NP_001287167.1  uncharacterized protein Dmel_CG12589, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287167.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V418, Q9VN78

    3. NM_144065.2 → NP_652322.1  uncharacterized protein Dmel_CG12589, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652322.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V418, Q9VN78
      Related
      FBpp0078484
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VN78 Q9VN78

    Gene LinkOut

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